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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
7
single cell RNA-seq
Assay category
7
DNA accessibility
7
Transcription
Date released
8
February, 2021
5
February, 2023
November, 2018
1
September, 2018
Available data
3014
bam
2830
bigWig
1612
bed narrowPeak
1469
tsv
1129
fastq
952
bigBed narrowPeak
358
tagAlign
312
bed broadPeak
275
bigBed broadPeak
239
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
19
hic
16
bedpe bed3+
7
bed bed3
7
csv
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
14
Homo sapiens
Biosample type
11
tissue
in vitro differentiated cells
2
primary cell
1
cell line
Organ
5
kidney
4
bone element
4
skeleton
2
liver
1
brain
1
connective tissue
Project
14
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
5
audit script error
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
month_released!
November, 2018
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
single cell RNA-seq
tissue
kidney
5
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
+ See 2 more…
primary cell
osteoblast
1
pancreatic cell
1
cell line
HepG2
1
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