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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
Assay category
133
DNA binding
Target of assay
295
histone
295
histone modification
162
narrow histone mark
133
broad histone mark
58
control
5
transcription factor
Date released
44
May, 2021
41
November, 2017
37
August, 2017
10
October, 2017
1
August, 2021
Available data
370
bigWig
363
bed narrowPeak
341
bam
235
bigBed narrowPeak
133
tagAlign
87
fastq
36
bed broadPeak
16
bigBed broadPeak
8
bed bed3+
Organism
129
Homo sapiens
Biosample type
76
tissue
51
primary cell
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
8
musculature of body
8
pancreas
4
adipose tissue
4
connective tissue
1
epithelium
Project
89
AMP
44
T1D
Genome assembly (visualization)
96
GRCh38
80
hg19
Lab
89
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent assembly
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
133 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
+ See 6 more…
primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
cell line
HepG2
6
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