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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
41
DNA methylation
Date released
101
May, 2022
Available data
3001
bam
2770
bigWig
1645
bed narrowPeak
1266
tsv
1089
fastq
1025
bigBed narrowPeak
358
tagAlign
321
bed broadPeak
284
bigBed broadPeak
248
bed bed3+
145
txt
101
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
16
bedpe bed3+
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
101
Homo sapiens
Biosample type
101
primary cell
Organ
80
epithelium
80
pancreas
Project
101
HPAP
Lab
101
Klaus Kaestner, Upenn
biosample_type!
in vitro differentiated cells
assay_title!
single cell RNA-seq
BIOSAMPLE
ASSAY
101 results
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Clear Filters
WGBS
ATAC-seq
snATAC-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
Langerhans cell
21
pancreatic acinar cell
4
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