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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
102
ATAC-seq
Assay category
128
DNA binding
102
DNA accessibility
Target of assay
117
histone
117
histone modification
65
broad histone mark
52
narrow histone mark
11
transcription factor
1
RNA binding protein
Date released
114
May, 2021
78
August, 2021
38
May, 2022
Available data
260
bigWig
230
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
64
xls
63
txt
7
hic
5
bedpe bed3+
3
cool
2
bed bed3+
2
bed broadPeak
1
bedpe
1
vcf
Organism
230
Homo sapiens
Biosample type
114
primary cell
102
tissue
14
cell line
in vitro differentiated cells
Organ
64
kidney
34
liver
18
pancreas
Project
146
AMP
84
T1D
Genome assembly (visualization)
166
hg19
148
GRCh38
Lab
AMP-T2D consortium
132
Kyle Gaulton, UCSD
64
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
biosample_type!
in vitro differentiated cells
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
230 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
30
tissue
kidney
64
liver
20
islet of Langerhans
18
cell line
HepG2
14
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