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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
52
ChIP-seq
37
total RNA-seq
32
ATAC-seq
7
single cell RNA-seq
5
pCHi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
Hi-C
Assay category
32
DNA accessibility
Date released
16
May, 2021
6
February, 2023
4
May, 2020
2
March, 2020
2
November, 2019
2
October, 2019
Available data
8
bam
7
tsv
6
bigWig
4
bed narrowPeak
Organism
32
Homo sapiens
Biosample type
19
cell line
12
primary cell
in vitro differentiated cells
1
tissue
Organ
20
epithelium
19
pancreas
1
adipose tissue
1
connective tissue
1
liver
Project
32
AMP
Genome assembly (visualization)
10
hg19
4
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
32
inconsistent ontology term
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
cell line
EndoC_BH1
19
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
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tissue
adipose tissue(adipose white tissue)
1
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