Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
274
ChIP-seq
Assay category
274
DNA binding
Target of assay
211
histone
211
histone modification
122
narrow histone mark
89
broad histone mark
58
control
5
transcription factor
Date released
78
November, 2017
71
August, 2017
50
May, 2020
49
October, 2019
14
October, 2017
8
February, 2021
4
August, 2021
Available data
2896
bam
2610
bigWig
1415
bed narrowPeak
1357
tsv
1025
bigBed narrowPeak
1022
fastq
319
bed broadPeak
284
bigBed broadPeak
274
tagAlign
246
bed bed3+
95
txt
36
bed bedMethyl
36
bigBed bedMethyl
12
hic
11
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
1
tagAlign bed3+
Organism
267
Homo sapiens
Biosample type
238
tissue
in vitro differentiated cells
20
cell line
16
primary cell
Organ
118
brain
86
liver
16
pancreas
15
musculature of body
8
adipose tissue
8
connective tissue
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
1
pituitary gland
Project
274
AMP
Genome assembly (visualization)
144
GRCh38
137
hg19
Lab
274
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
4
missing controlled_by
Audit category:
11
inconsistent control read length
2
inconsistent assembly
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
274 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
70
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
skeletal muscle tissue
15
+ See 43 more…
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
primary cell
skeletal muscle myoblast
12
hepatocyte
4
See all biosamples
Download