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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
83
DNA binding
Target of assay
53
histone
53
histone modification
30
transcription factor
28
narrow histone mark
25
broad histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
34
August, 2017
32
September, 2018
10
November, 2017
4
October, 2017
3
November, 2018
Available data
83
fastq
82
bam
81
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
83
Homo sapiens
Biosample type
44
primary cell
26
tissue
13
cell line
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
13
liver
12
adipose tissue
12
connective tissue
4
brain
Project
83
AMP
Genome assembly (visualization)
81
hg19
74
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
83
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
biosample_type!
in vitro differentiated cells
month_released!
June, 2018
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
4
cell line
HepG2
13
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