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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
5
February, 2023
1
February, 2021
Available data
3097
bam
2907
bigWig
1684
bed narrowPeak
1466
tsv
1214
fastq
1025
bigBed narrowPeak
358
tagAlign
321
bed broadPeak
284
bigBed broadPeak
248
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
6
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
in vitro differentiated cells
5
tissue
1
primary cell
Organ
4
bone element
4
skeleton
1
brain
1
connective tissue
Project
6
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
inconsistent replicate
biosample_type!
in vitro differentiated cells
month_released!
June, 2018
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
osteoblast
1
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