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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
169
ChIP-seq
Assay category
169
DNA binding
Target of assay
97
histone
97
histone modification
61
broad histone mark
36
control
36
narrow histone mark
36
transcription factor
7
RNA binding protein
2
chromatin remodeller
Date released
689
February, 2021
385
November, 2017
341
May, 2020
333
August, 2017
306
October, 2019
277
August, 2021
267
May, 2021
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
49
April, 2018
49
December, 2017
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
169
bam
133
bed narrowPeak
133
bigBed narrowPeak
133
bigWig
49
fastq
1
bed bed3+
Organism
169
Homo sapiens
Biosample type
163
tissue
in vitro differentiated cells
5
primary cell
1
stem cell
Organ
50
blood vessel
50
vasculature
48
liver
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
2
pancreas
Project
169
AMP
Genome assembly (visualization)
134
hg19
133
GRCh38
Lab
169
AMP-T2D consortium
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
inconsistent control read length
biosample_type!
in vitro differentiated cells
month_released!
June, 2019
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
169 results
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ChIP-seq
tissue
liver
38
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
primary cell
kidney epithelial cell
5
stem cell
hESC
1
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