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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
Assay category
90
DNA binding
Target of assay
821
histone modification
820
histone
419
narrow histone mark
412
transcription factor
401
broad histone mark
298
control
90
RNA binding protein
89
recombinant protein
28
chromatin remodeller
5
nucleotide modification
4
other context
4
other post-translational modification
Date released
30
November, 2017
21
November, 2018
11
October, 2018
6
January, 2019
5
May, 2019
5
May, 2024
4
April, 2019
June, 2019
2
August, 2017
2
December, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
96
bigWig
95
bed narrowPeak
93
bam
87
bigBed narrowPeak
83
fastq
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
90
Homo sapiens
Biosample type
61
cell line
28
tissue
in vitro differentiated cells
1
primary cell
Organ
52
liver
10
blood
10
bodily fluid
10
heart
9
pancreas
5
adipose tissue
5
connective tissue
3
blood vessel
3
vasculature
2
epithelium
2
kidney
1
artery
Project
90
AMP
Genome assembly (visualization)
83
GRCh38
81
hg19
Lab
84
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
biosample_type!
in vitro differentiated cells
month_released!
June, 2019
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
cell line
HepG2
50
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
islet of Langerhans
2
+ See 9 more…
primary cell
kidney epithelial cell
1
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