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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
688
histone modification
687
histone
447
transcription factor
356
broad histone mark
331
narrow histone mark
246
control
89
RNA binding protein
89
recombinant protein
33
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
34
November, 2017
21
November, 2018
October, 2018
6
January, 2019
5
May, 2019
5
May, 2024
4
April, 2019
4
August, 2017
4
June, 2019
2
December, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
86
bigWig
85
bed narrowPeak
83
bam
77
bigBed narrowPeak
69
fastq
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
1
tar
Organism
89
Homo sapiens
Biosample type
65
cell line
17
tissue
in vitro differentiated cells
7
primary cell
Organ
56
liver
11
heart
10
blood
10
bodily fluid
6
epithelium
5
vasculature
4
blood vessel
brain
3
kidney
3
pancreas
1
artery
1
connective tissue
1
eye
Project
89
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
83
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
biosample_type!
in vitro differentiated cells
month_released!
October, 2018
organ_slims!
brain
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
tissue
left cardiac atrium
5
heart left ventricle
3
islet of Langerhans
2
ascending aorta
1
coronary artery
1
+ See 5 more…
primary cell
skeletal muscle myoblast
2
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 1 more…
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