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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
457
ChIP-seq
Assay category
457
DNA binding
Target of assay
275
transcription factor
95
histone
95
histone modification
84
control
66
recombinant protein
54
broad histone mark
41
narrow histone mark
39
RNA binding protein
17
chromatin remodeller
2
other context
2
other post-translational modification
Date released
689
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
306
October, 2019
277
August, 2021
267
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
443
bam
375
fastq
372
bigWig
351
bed narrowPeak
348
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
bed bed3+
3
tar
Organism
457
Homo sapiens
Biosample type
315
cell line
130
tissue
in vitro differentiated cells
9
primary cell
3
stem cell
Organ
363
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
457
AMP
Genome assembly (visualization)
320
hg19
319
GRCh38
Lab
457
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
23
inconsistent control read length
4
inconsistent control run_type
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
457 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
liver
38
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 3 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
stem cell
hESC
3
See all biosamples
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