Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
48
single cell RNA-seq
21
ChIP-seq
Assay category
173
Transcription
21
DNA binding
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
control
3
narrow histone mark
Date released
686
February, 2021
335
November, 2017
318
May, 2020
301
August, 2017
272
August, 2021
267
October, 2019
264
May, 2021
210
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
September, 2018
66
April, 2019
59
September, 2020
56
March, 2020
54
November, 2019
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
38
December, 2017
31
December, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
190
bam
190
bigWig
169
tsv
76
fastq
21
bed narrowPeak
21
bigBed narrowPeak
Organism
194
Homo sapiens
Biosample type
126
tissue
48
primary cell
20
cell line
Organ
157
pancreas
33
epithelium
15
blood
15
bodily fluid
6
spleen
5
liver
2
connective tissue
Project
194
AMP
Genome assembly (visualization)
190
GRCh38
190
hg19
Lab
194
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
in vitro differentiated cells
target.investigated_as!
control
BIOSAMPLE
ASSAY
194 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
spleen
6
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
GM12878
15
HepG2
5
See all biosamples
Download