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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
48
single cell RNA-seq
11
ChIP-seq
Assay category
173
Transcription
11
DNA binding
Target of assay
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
684
February, 2021
341
May, 2020
318
August, 2017
299
October, 2019
267
May, 2021
266
August, 2021
214
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
162
November, 2017
115
May, 2019
108
July, 2019
74
April, 2019
73
September, 2018
61
October, 2018
59
September, 2020
56
March, 2020
55
November, 2019
49
April, 2018
47
September, 2023
35
May, 2024
25
February, 2020
24
November, 2018
23
October, 2017
20
December, 2017
19
April, 2020
16
January, 2019
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
180
bam
176
bigWig
169
tsv
66
fastq
7
bed narrowPeak
7
bigBed narrowPeak
Organism
184
Homo sapiens
Biosample type
127
tissue
48
primary cell
9
cell line
Organ
157
pancreas
33
epithelium
7
spleen
5
liver
4
blood
4
bodily fluid
2
connective tissue
Project
184
AMP
Genome assembly (visualization)
176
GRCh38
176
hg19
Lab
184
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
in vitro differentiated cells
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
184 results
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total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
120
spleen
7
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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cell line
HepG2
5
GM12878
4
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