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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
152
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
152
DNA binding
27
Transcription
14
DNA accessibility
Target of assay
124
histone
124
histone modification
75
broad histone mark
49
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
689
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
306
October, 2019
277
August, 2021
267
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
192
bam
169
bigWig
143
bed narrowPeak
111
bigBed narrowPeak
73
fastq
26
tsv
1
csv
Organism
193
Homo sapiens
Biosample type
115
tissue
78
primary cell
Organ
74
pancreas
66
epithelium
50
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
Project
193
AMP
Genome assembly (visualization)
169
hg19
168
GRCh38
Lab
193
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
32
missing controlled_by
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
193 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 6 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 2 more…
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