Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
4
total RNA-seq
2
ATAC-seq
1
ChIP-seq
1
Hi-C
Assay category
4
Transcription
2
DNA accessibility
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
324
November, 2017
227
May, 2021
148
May, 2020
144
February, 2021
134
May, 2022
94
February, 2023
73
September, 2018
64
October, 2019
62
November, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
August, 2021
48
July, 2018
43
April, 2018
31
July, 2019
28
December, 2018
23
January, 2019
16
March, 2020
16
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
5
December, 2019
5
March, 2023
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
December, 2017
3
June, 2018
2
January, 2018
2
October, 2018
Available data
13
tsv
7
bigWig
5
bam
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
16
Homo sapiens
Biosample type
tissue
11
cell line
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
6
epithelium
5
pancreas
2
kidney
1
blood vessel
1
connective tissue
1
mammary gland
1
vasculature
1
vein
Project
13
AMP
3
T1D
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
biosample_type!
in vitro differentiated cells
tissue
organ_slims!
esophagus
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download