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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
18
ATAC-seq
9
total RNA-seq
Assay category
33
DNA binding
18
DNA accessibility
9
Transcription
Target of assay
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
3
control
Date released
36
May, 2021
24
May, 2022
Available data
48
bed narrowPeak
35
bigWig
24
bam
24
fastq
6
txt
2
bed bed3+
Organism
60
Homo sapiens
Biosample type
in vitro differentiated cells
35
primary cell
25
tissue
Organ
25
pancreas
Project
235
T1D
60
AMP
Genome assembly (visualization)
53
hg19
Lab
3563
AMP-T2D consortium
142
Katalin Susztak, Upenn
60
Kyle Gaulton, UCSD
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
biosample_type!
in vitro differentiated cells
organ_slims!
thymus
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
ATAC-seq
total RNA-seq
primary cell
CD8-positive, alpha-beta T cell
33
2
tissue
islet of Langerhans
18
6
pancreas
1
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