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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
6
ATAC-seq
6
WGBS
2
DNase-seq
1
RNA microarray
1
total RNA-seq
Assay category
8
DNA accessibility
6
DNA methylation
1
Transcription
Date released
7
August, 2017
1
August, 2021
1
February, 2023
1
January, 2018
1
June, 2019
1
May, 2023
1
November, 2018
1
November, 2019
1
October, 2017
1
October, 2019
Available data
406
bigWig
405
bam
tsv
6
bed narrowPeak
6
fastq
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
15
Homo sapiens
Biosample type
16
tissue
in vitro differentiated cells
Organ
311
pancreas
278
kidney
239
epithelium
101
bone element
91
heart
66
vasculature
65
liver
63
blood vessel
51
eye
49
artery
49
limb
48
musculature of body
42
brain
28
connective tissue
19
lung
18
ureter
16
adipose tissue
16
skeleton
9
blood
9
bodily fluid
5
vein
4
spleen
3
nerve
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
16
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
in vitro differentiated cells
files.file_type!
tsv
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ATAC-seq
WGBS
DNase-seq
RNA microarray
total RNA-seq
tissue
adipose tissue
3
3
1
omental fat pad
1
2
subcutaneous abdominal adipose tissue
3
subcutaneous adipose tissue
1
1
adipose tissue(adipose white tissue)
1
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