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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
DNase-seq
4
ChIP-seq
Assay category
80
DNA accessibility
4
DNA binding
Target of assay
4
transcription factor
Date released
79
June, 2019
4
August, 2017
1
November, 2018
Available data
586
bam
556
bigWig
425
tsv
196
bed narrowPeak
114
bigBed narrowPeak
84
bed bed3+
81
bed broadPeak
80
bigBed broadPeak
64
xls
62
txt
43
fastq
8
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
5
csv
1
hic
Organism
84
Homo sapiens
Biosample type
74
tissue
10
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
21
epithelium
18
ureter
14
connective tissue
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
2
nerve
2
vein
1
spleen
Project
84
AMP
Genome assembly (visualization)
84
GRCh38
77
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
84 results
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DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 6 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney capillary endothelial cell
1
+ See 3 more…
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