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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
3
MeRIP-seq
Assay category
23
DNA binding
Target of assay
78
histone
78
histone modification
41
narrow histone mark
37
broad histone mark
26
control
6
RNA binding protein
6
transcription factor
3
nucleotide modification
Date released
12
August, 2017
3
November, 2020
3
October, 2019
2
June, 2019
2
November, 2017
2
November, 2019
1
August, 2021
1
May, 2019
Available data
23
bam
14
fastq
2
bigWig
1
tagAlign
Organism
26
Homo sapiens
Biosample type
21
primary cell
5
cell line
in vitro differentiated cells
Organ
107
liver
52
pancreas
31
brain
27
connective tissue
26
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
26
AMP
Genome assembly (visualization)
2
hg19
Lab
23
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
7
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
MeRIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
brain microvascular endothelial cell
1
+ See 4 more…
cell line
EndoC_BH1
2
3
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