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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
ChIP-seq
Assay category
150
DNA binding
Target of assay
150
histone
150
histone modification
78
broad histone mark
72
narrow histone mark
52
control
18
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
66
August, 2017
32
September, 2018
30
October, 2018
10
November, 2019
7
October, 2019
3
March, 2020
1
May, 2019
1
May, 2021
Available data
141
bigWig
136
bam
126
bed narrowPeak
100
fastq
49
bigBed narrowPeak
14
tagAlign
12
bed bed3+
12
bed broadPeak
Organism
144
Homo sapiens
Biosample type
73
tissue
58
primary cell
19
cell line
in vitro differentiated cells
Organ
187
brain
150
pancreas
91
liver
78
epithelium
71
vasculature
70
blood vessel
62
heart
49
limb
41
connective tissue
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
146
AMP
4
T1D
Genome assembly (visualization)
141
hg19
135
GRCh38
Lab
150
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
48
missing controlled_by
Audit category:
9
inconsistent control read length
1
inconsistent assembly
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
150 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
30
body of pancreas
17
endocrine pancreas
14
pancreas
12
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
pancreatic alpha cell
7
pancreatic beta cell
7
cell line
EndoC_BH1
12
Panc1
7
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