Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
31
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
31
DNA binding
Target of assay
23
histone
23
histone modification
transcription factor
12
narrow histone mark
11
broad histone mark
8
control
2
RNA binding protein
Date released
14
August, 2017
12
December, 2017
3
August, 2021
2
September, 2017
Available data
1090
bam
892
bigWig
854
bed narrowPeak
400
fastq
396
bigBed narrowPeak
389
tagAlign
65
bed broadPeak
31
bed bed3+
30
bigBed broadPeak
1
tagAlign bed3+
Organism
31
Homo sapiens
Biosample type
15
tissue
13
in vitro differentiated cells
3
primary cell
stem cell
Organ
14
pancreas
4
liver
3
embryo
3
epithelium
1
connective tissue
Project
31
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
31
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
4
inconsistent control read length
biosample_type!
stem cell
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
liver
1
in vitro differentiated cells
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
adipocyte
1
primary cell
hepatocyte
3
Download