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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
574
histone modification
573
histone
306
narrow histone mark
267
broad histone mark
control
91
transcription factor
25
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
31
December, 2017
23
August, 2017
15
October, 2018
7
November, 2018
6
April, 2019
5
May, 2024
3
December, 2018
1
May, 2019
Available data
90
bigWig
86
bam
79
fastq
72
bed narrowPeak
62
bigBed narrowPeak
13
bed bed3+
Organism
91
Homo sapiens
Biosample type
357
cell line
91
tissue
49
in vitro differentiated cells
9
primary cell
Organ
39
liver
17
adipose tissue
17
connective tissue
17
pancreas
12
heart
6
spleen
blood vessel
3
vasculature
1
artery
1
kidney
Project
91
AMP
Genome assembly (visualization)
90
GRCh38
85
hg19
Lab
86
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
biosample_type!
stem cell
target.investigated_as!
control
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
tissue
liver
37
white adipose tissue
12
body of pancreas
9
islet of Langerhans
7
spleen
6
heart left ventricle
5
left cardiac atrium
5
omental fat pad
3
right lobe of liver
2
subcutaneous adipose tissue
2
kidney
1
pancreas
1
right atrium auricular region
1
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