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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
42
transcription factor
27
histone
27
histone modification
18
control
14
broad histone mark
13
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
587
February, 2021
406
November, 2017
405
August, 2017
333
May, 2020
316
August, 2021
309
May, 2021
291
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
87
December, 2017
85
July, 2019
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
March, 2020
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
4
August, 2018
4
October, 2022
3
March, 2023
2
June, 2018
1
August, 2022
Available data
87
bam
87
fastq
68
bed narrowPeak
68
bigWig
50
bigBed narrowPeak
12
bed bed3+
Organism
87
Homo sapiens
Biosample type
48
tissue
39
in vitro differentiated cells
stem cell
Organ
63
liver
15
epithelium
9
embryo
Project
87
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
87
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
8
inconsistent control read length
biosample_type!
stem cell
files.file_type!
bigBed bedMethyl
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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