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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
Assay category
8
DNA binding
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
2
December, 2017
2
June, 2019
2
November, 2017
1
May, 2019
1
November, 2019
Available data
8
bam
8
bed narrowPeak
8
bigWig
7
bigBed narrowPeak
4
fastq
2
bed broadPeak
2
bigBed broadPeak
Organism
8
Homo sapiens
Biosample type
5
primary cell
2
in vitro differentiated cells
1
cell line
Organ
56
liver
10
blood
10
bodily fluid
8
epithelium
5
connective tissue
3
brain
2
kidney
2
vasculature
1
blood vessel
1
eye
1
heart
1
pancreas
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
biosample_type!
tissue
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
2
cell line
EndoC_BH1
1
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