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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
30
DNase-seq
Assay category
30
DNA accessibility
Date released
24
June, 2019
3
October, 2019
2
August, 2017
1
November, 2020
Available data
629
bam
615
bigWig
524
tsv
337
fastq
153
zippedFastqFolder
103
bed narrowPeak
57
bigBed narrowPeak
43
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
txt
3
cool
2
csv
2
ibed
1
tar
1
vcf
Organism
30
Homo sapiens
Biosample type
tissue
28
primary cell
1
cell line
1
in vitro differentiated cells
Organ
16
epithelium
10
kidney
7
connective tissue
6
vasculature
5
brain
4
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
1
pancreas
Project
30
AMP
Genome assembly (visualization)
29
GRCh38
23
hg19
Lab
30
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
biosample_type!
tissue
assay_title!
ChIP-seq
month_released!
August, 2020
BIOSAMPLE
ASSAY
30 results
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DNase-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 18 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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