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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
Available data
1485
bam
1397
bigWig
981
fastq
833
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
Organism
7
Homo sapiens
Biosample type
7
in vitro differentiated cells
Organ
4
connective tissue
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
assay_title!
whole genome sequencing assay
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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