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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
Assay category
54
DNA binding
Target of assay
45
histone
45
histone modification
24
narrow histone mark
21
broad histone mark
9
transcription factor
4
chromatin remodeller
1
RNA binding protein
Date released
32
September, 2018
17
August, 2017
3
November, 2017
2
November, 2018
Available data
54
bam
54
bigWig
54
fastq
37
bed narrowPeak
5
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
44
primary cell
tissue
5
cell line
5
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
5
connective tissue
5
liver
Project
54
AMP
Genome assembly (visualization)
61
hg19
54
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
54
missing controlled_by
Audit category:
4
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
5
in vitro differentiated cells
adipocyte
5
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