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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
Assay category
21
DNA binding
Target of assay
351
histone
351
histone modification
179
broad histone mark
171
narrow histone mark
73
control
59
transcription factor
21
RNA binding protein
4
chromatin remodeller
Date released
6
August, 2017
5
May, 2021
4
June, 2019
3
November, 2017
2
December, 2017
1
May, 2019
Available data
16
bam
16
bed narrowPeak
16
bigWig
12
bigBed narrowPeak
11
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
21
Homo sapiens
Biosample type
cell line
tissue
11
in vitro differentiated cells
10
primary cell
Organ
7
epithelium
5
connective tissue
3
brain
2
kidney
2
liver
2
vasculature
1
blood vessel
1
eye
1
heart
Project
21
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
16
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
biosample_type!
tissue
cell line
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
hepatocyte
2
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac fibroblast
1
cardiac muscle cell
1
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