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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
685
ChIP-seq
249
total RNA-seq
71
ATAC-seq
15
pCHi-C
8
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
2
HiChIP
2
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Date released
5
August, 2021
1
March, 2023
Organism
5
Homo sapiens
Biosample type
5
cell line
1
stem cell
Organ
2
kidney
2
liver
Project
5
AMP
1
community
Lab
5
Bing Ren, UCSD
1
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
primary cell
BIOSAMPLE
ASSAY
6 results
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STARR-seq
CRISPRi RNA-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
stem cell
SB Ad3.1
1