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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
6
total RNA-seq
3
Hi-C
2
ATAC-seq
1
ChIP-seq
Assay category
6
Transcription
3
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
359
May, 2021
324
November, 2017
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
104
February, 2021
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
43
April, 2018
43
December, 2017
39
February, 2018
29
July, 2019
28
December, 2018
23
January, 2019
21
November, 2019
20
March, 2020
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
5
January, 2018
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2023
2
October, 2018
Available data
13
tsv
9
bigWig
7
bam
5
bedpe bed3+
3
hic
2
ibed
1
bed narrowPeak
Organism
20
Homo sapiens
Biosample type
tissue
11
cell line
8
in vitro differentiated cells
stem cell
1
primary cell
Organ
6
epithelium
5
pancreas
2
kidney
1
blood vessel
1
mammary gland
1
vasculature
1
vein
Project
17
AMP
3
T1D
Genome assembly (visualization)
14
hg19
7
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
biosample_type!
tissue
stem cell
organ_slims!
artery
BIOSAMPLE
ASSAY
20 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
1
lymphocyte of B lineage (iPSC)
1
1
1
embryonic stem cell
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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