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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
2
Hi-C
Assay category
10
DNA accessibility
2
3D chromatin structure
Date released
7
August, 2020
3
September, 2020
1
March, 2023
1
October, 2019
Available data
bam
1218
bigWig
749
bed narrowPeak
671
fastq
483
tsv
443
bigBed narrowPeak
130
tagAlign
91
bed broadPeak
91
bigBed broadPeak
54
bed bed3+
2
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
hic
Organism
12
Homo sapiens
Biosample type
tissue
11
primary cell
1
cell line
Organ
11
pancreas
10
epithelium
Project
10
HPAP
1
AMP
1
ITG
Genome assembly (visualization)
108
hg19
12
GRCh38
5
hg18
Lab
10
Klaus Kaestner, Upenn
1
AMP-T2D consortium
1
ITG
Audit category:
1
inconsistent assembly
biosample_type!
tissue
files.file_type!
bam
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
chondrocytes
1
cell line
Panc1
1
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