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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
16
control
14
histone
14
histone modification
9
broad histone mark
5
narrow histone mark
Date released
15
August, 2017
8
August, 2021
3
February, 2021
3
November, 2017
1
May, 2021
Available data
310
fastq
229
bam
179
bigWig
153
zippedFastqFolder
84
bed narrowPeak
41
tsv
38
bigBed narrowPeak
30
tagAlign
18
bed broadPeak
18
bigBed broadPeak
14
bed bed3+
13
bedpe bed3+
11
hic
bed bedMethyl
10
bigBed bedMethyl
7
bed bedgraph
5
bed bed3
4
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
30
Homo sapiens
Biosample type
tissue
22
in vitro differentiated cells
6
cell line
2
primary cell
Organ
14
connective tissue
4
liver
2
artery
2
blood vessel
2
epithelium
2
heart
2
vasculature
1
pancreas
Project
30
AMP
Genome assembly (visualization)
133
hg19
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
2
inconsistent control read length
biosample_type!
tissue
files.file_type!
bed bedMethyl
assembly!
GRCh38
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
3
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
skeletal muscle myoblast
1
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