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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
37
histone
37
histone modification
20
broad histone mark
17
narrow histone mark
14
control
9
transcription factor
Date released
20
August, 2021
14
August, 2017
12
November, 2017
8
February, 2021
6
May, 2021
Available data
876
bam
784
bigWig
572
fastq
538
bed narrowPeak
372
bigBed narrowPeak
254
tsv
60
bed broadPeak
60
bigBed broadPeak
60
tagAlign
31
bed bed3+
9
bedpe bed3+
7
bed bedgraph
6
bed bed3
6
hic
4
txt
3
tar
2
ibed
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
vcf
Organism
60
Homo sapiens
Biosample type
tissue
primary cell
40
in vitro differentiated cells
20
cell line
Organ
14
connective tissue
12
liver
6
artery
6
blood vessel
6
heart
6
vasculature
3
epithelium
3
pancreas
Project
60
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
11
inconsistent control read length
biosample_type!
tissue
primary cell
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
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