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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
24
DNase-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
31
DNA binding
24
DNA accessibility
3
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
126
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
61
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
28
December, 2018
24
March, 2020
23
January, 2019
22
July, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
58
bam
50
bigWig
47
bed narrowPeak
47
bigBed narrowPeak
24
bed bed3+
24
bed broadPeak
24
bigBed broadPeak
4
fastq
3
tsv
1
bedpe bed3+
Organism
59
Homo sapiens
Biosample type
tissue
58
primary cell
1
in vitro differentiated cells
Organ
23
epithelium
18
connective tissue
13
kidney
11
musculature of body
8
heart
5
brain
4
eye
4
vasculature
3
pancreas
2
blood vessel
2
liver
1
adipose tissue
Project
59
AMP
Genome assembly (visualization)
50
GRCh38
43
hg19
Lab
59
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
DNase-seq
single cell RNA-seq
pCHi-C
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
3
1
epithelial cell of proximal tubule
3
1
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in vitro differentiated cells
white fat cell
1
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