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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
36
single cell RNA-seq
21
snATAC-seq
1
pCHi-C
Assay category
60
DNA accessibility
41
DNA methylation
36
Transcription
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
126
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
61
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
28
December, 2018
24
March, 2020
23
January, 2019
22
July, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
134
zippedFastqFolder
4
fastq
3
bam
3
bigWig
3
tsv
1
bedpe bed3+
Organism
138
Homo sapiens
Biosample type
137
primary cell
tissue
1
in vitro differentiated cells
Organ
83
epithelium
83
pancreas
1
adipose tissue
1
connective tissue
Project
134
HPAP
4
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
134
Klaus Kaestner, Upenn
4
AMP-T2D consortium
biosample_type!
tissue
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
138 results
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Clear Filters
WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
pCHi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
2
pancreatic beta cell
16
13
pancreatic acinar cell
4
1
in vitro differentiated cells
white fat cell
1
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