Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
77
DNA binding
Target of assay
371
transcription factor
359
histone
359
histone modification
182
broad histone mark
176
narrow histone mark
156
control
89
recombinant protein
77
RNA binding protein
29
chromatin remodeller
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
30
November, 2017
21
November, 2018
6
January, 2019
5
May, 2021
4
August, 2017
4
June, 2019
2
December, 2017
2
December, 2018
1
August, 2021
1
May, 2019
1
November, 2019
Available data
80
bam
79
bed narrowPeak
79
bigWig
74
fastq
73
bigBed narrowPeak
9
bed broadPeak
bigBed broadPeak
1
tar
Organism
77
Homo sapiens
Biosample type
61
cell line
tissue
11
in vitro differentiated cells
5
primary cell
Organ
52
liver
10
blood
10
bodily fluid
6
epithelium
5
connective tissue
2
kidney
1
eye
1
heart
1
pancreas
Project
77
AMP
Genome assembly (visualization)
69
hg19
66
GRCh38
Lab
71
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
biosample_type!
tissue
files.file_type!
bed bedMethyl
bigBed broadPeak
BIOSAMPLE
ASSAY
77 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
50
GM12878
10
EndoC_BH1
1
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
hepatocyte
2
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
Download