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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
8
DNA accessibility
3
DNA binding
Target of assay
3
transcription factor
1
RNA binding protein
Date released
5
February, 2023
3
November, 2017
2
February, 2021
1
October, 2019
Available data
1485
bam
1397
bigWig
981
fastq
833
bed narrowPeak
524
tsv
481
bigBed narrowPeak
160
tagAlign
153
zippedFastqFolder
109
bed broadPeak
109
bigBed broadPeak
68
bed bed3+
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
csv
2
ibed
1
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
tissue
4
cell line
2
primary cell
Organ
6
connective tissue
4
liver
1
blood vessel
1
epithelium
1
vasculature
1
vein
Project
11
AMP
Genome assembly (visualization)
11
hg19
2
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent replicate
biosample_type!
tissue
BIOSAMPLE
ASSAY
11 results
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Clear Filters
ATAC-seq
ChIP-seq
FAIRE-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
3
primary cell
endothelial cell of umbilical vein
1
osteoblast
1
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