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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
3
ATAC-seq
3
DNase-seq
Assay category
14
DNA binding
6
DNA accessibility
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
255
November, 2017
56
November, 2018
47
June, 2019
27
December, 2018
23
October, 2019
20
August, 2017
15
January, 2019
14
December, 2017
14
September, 2018
5
September, 2017
4
May, 2019
1
November, 2020
Available data
112
bam
112
fastq
94
bigWig
76
bed narrowPeak
26
tagAlign
20
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
tissue
19
primary cell
1
in vitro differentiated cells
Organ
3
epithelium
3
pancreas
1
connective tissue
Project
20
AMP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
ATAC-seq
DNase-seq
primary cell
skeletal muscle myoblast
14
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
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