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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
total RNA-seq
14
ATAC-seq
8
ChIP-seq
2
pCHi-C
Assay category
101
Transcription
14
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
359
May, 2021
148
May, 2020
134
May, 2022
125
February, 2021
90
August, 2021
72
October, 2019
55
June, 2019
34
February, 2023
31
July, 2019
24
March, 2020
21
November, 2019
18
September, 2020
15
August, 2017
12
November, 2020
8
January, 2021
7
December, 2019
April, 2018
5
March, 2023
5
May, 2019
4
October, 2022
1
January, 2018
Available data
120
bam
107
bigWig
107
tsv
fastq
15
bed narrowPeak
8
tagAlign
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
125
Homo sapiens
Biosample type
tissue
96
cell line
26
in vitro differentiated cells
3
primary cell
Organ
66
artery
66
blood vessel
66
heart
66
vasculature
26
epithelium
26
pancreas
11
connective tissue
2
liver
Project
125
AMP
Genome assembly (visualization)
122
hg19
116
GRCh38
Lab
125
AMP-T2D consortium
Audit category:
44
inconsistent ontology term
1
inconsistent replicate
biosample_type!
tissue
month_released!
April, 2018
files.file_type!
fastq
BIOSAMPLE
ASSAY
125 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
EndoC_BH1
26
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
primary cell
osteoblast
1
1
1
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