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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
139
ATAC-seq
47
total RNA-seq
41
WGBS
33
single cell RNA-seq
21
snATAC-seq
1
pCHi-C
Assay category
160
DNA accessibility
80
Transcription
41
DNA methylation
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
134
zippedFastqFolder
90
bam
90
bigWig
46
tsv
Organism
282
Homo sapiens
Biosample type
281
primary cell
tissue
1
cell line
Organ
80
epithelium
80
pancreas
1
liver
Project
134
HPAP
103
AMP
45
T1D
Genome assembly (visualization)
90
hg19
45
GRCh38
Lab
134
Klaus Kaestner, Upenn
103
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
biosample_type!
tissue
month_released!
September, 2018
BIOSAMPLE
ASSAY
282 results
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Clear Filters
ATAC-seq
total RNA-seq
WGBS
single cell RNA-seq
snATAC-seq
pCHi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
+ See 28 more…
cell line
HepG2
1
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