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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
single cell RNA-seq
46
ChIP-seq
Assay category
48
Transcription
46
DNA binding
Target of assay
26
histone
26
histone modification
14
narrow histone mark
12
broad histone mark
11
transcription factor
9
control
2
RNA binding protein
1
chromatin remodeller
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
94
bam
94
fastq
84
bigWig
48
tsv
36
bed narrowPeak
15
bed bed3+
14
bigBed narrowPeak
Organism
94
Homo sapiens
Biosample type
tissue
48
primary cell
43
in vitro differentiated cells
3
stem cell
Organ
52
epithelium
37
pancreas
15
liver
13
embryo
2
connective tissue
Project
94
AMP
Genome assembly (visualization)
89
GRCh38
89
hg19
Lab
94
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
94 results
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Clear Filters
single cell RNA-seq
ChIP-seq
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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