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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
DNase-seq
9
ChIP-seq
Assay category
21
DNA accessibility
9
DNA binding
Target of assay
4
control
3
histone
3
histone modification
3
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
324
November, 2017
269
May, 2021
140
May, 2020
134
May, 2022
127
August, 2017
126
February, 2021
99
February, 2023
87
August, 2021
73
September, 2018
62
November, 2018
59
September, 2020
51
October, 2019
43
April, 2018
42
December, 2017
42
July, 2018
39
February, 2018
30
June, 2019
29
July, 2019
28
December, 2018
23
January, 2019
9
March, 2020
8
January, 2021
7
August, 2020
6
January, 2018
6
November, 2020
5
December, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
2
June, 2018
2
May, 2019
2
October, 2018
Available data
30
bam
26
bed narrowPeak
26
bigBed narrowPeak
26
bigWig
21
bed bed3+
21
bed broadPeak
21
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
tissue
30
primary cell
Organ
16
epithelium
9
kidney
5
brain
5
connective tissue
4
eye
3
heart
3
musculature of body
3
vasculature
2
blood vessel
2
liver
Project
30
AMP
Genome assembly (visualization)
26
GRCh38
19
hg19
Lab
30
AMP-T2D consortium
Audit category:
inconsistent ontology term
biosample_type!
tissue
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
30 results
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DNase-seq
ChIP-seq
primary cell
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
cardiac fibroblast
2
1
skeletal muscle cell
1
2
glomerular visceral epithelial cell
2
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