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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
135
total RNA-seq
91
ChIP-seq
13
ATAC-seq
Assay category
135
Transcription
91
DNA binding
13
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
4
transcription factor
1
control
Date released
323
November, 2017
239
May, 2021
120
February, 2021
112
August, 2017
90
May, 2020
72
September, 2018
64
October, 2019
61
November, 2018
55
June, 2019
49
August, 2021
48
July, 2018
December, 2017
43
April, 2018
39
February, 2018
27
December, 2018
23
January, 2019
20
November, 2019
18
July, 2019
7
March, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
3
August, 2018
3
June, 2018
2
October, 2018
Available data
265
bigWig
239
bam
135
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
239
Homo sapiens
Biosample type
149
primary cell
85
in vitro differentiated cells
tissue
5
cell line
Organ
10
epithelium
8
pancreas
2
embryo
1
connective tissue
1
heart
Project
136
T1D
103
AMP
Genome assembly (visualization)
238
GRCh38
238
hg19
Lab
135
Kyle Gaulton, UCSD
104
AMP-T2D consortium
Audit category:
73
inconsistent ontology term
biosample_type!
tissue
month_released!
December, 2017
BIOSAMPLE
ASSAY
239 results
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total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
51
84
13
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
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cell line
EndoC_BH1
4
1
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