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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
277
ChIP-seq
Assay category
277
DNA binding
Target of assay
240
transcription factor
66
recombinant protein
35
RNA binding protein
18
histone
18
histone modification
16
control
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
277
November, 2017
265
May, 2021
107
February, 2021
94
August, 2017
90
May, 2020
72
September, 2018
57
November, 2018
48
July, 2018
47
August, 2021
47
June, 2019
47
October, 2019
43
April, 2018
36
December, 2017
31
February, 2018
27
December, 2018
22
July, 2019
20
January, 2019
12
November, 2019
9
March, 2020
7
August, 2020
6
January, 2018
5
December, 2019
5
November, 2020
5
September, 2017
4
May, 2019
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
2
October, 2018
Available data
324
fastq
323
bam
277
bigWig
255
bed narrowPeak
255
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
12
tagAlign
3
tar
Organism
277
Homo sapiens
Biosample type
268
cell line
tissue
9
primary cell
Organ
268
liver
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
277
AMP
Genome assembly (visualization)
275
hg19
223
GRCh38
Lab
277
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
277 results
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Clear Filters
ChIP-seq
cell line
HepG2
268
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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