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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
26
total RNA-seq
14
ATAC-seq
2
single cell RNA-seq
1
WGBS
Assay category
92
DNA binding
28
Transcription
14
DNA accessibility
1
DNA methylation
Target of assay
57
transcription factor
32
histone
32
histone modification
21
RNA binding protein
17
broad histone mark
16
recombinant protein
15
narrow histone mark
7
chromatin remodeller
3
control
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
135
fastq
133
bam
129
bigWig
102
bed narrowPeak
70
bigBed narrowPeak
26
tsv
2
csv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
135
Homo sapiens
Biosample type
74
primary cell
61
cell line
tissue
Organ
72
pancreas
61
epithelium
46
liver
15
blood
15
bodily fluid
Project
135
AMP
Genome assembly (visualization)
129
GRCh38
126
hg19
Lab
135
AMP-T2D consortium
Audit category:
35
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
WGBS
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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cell line
HepG2
45
1
GM12878
15
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