Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
4
single cell RNA-seq
1
pCHi-C
1
small RNA-seq
Assay category
20
Transcription
Date released
6
July, 2019
5
February, 2021
4
November, 2020
2
April, 2018
2
July, 2018
1
March, 2020
1
May, 2021
Available data
94
bam
87
bigWig
61
bed narrowPeak
58
fastq
21
tsv
19
bed bed3+
17
bigBed narrowPeak
14
tagAlign
6
bed bed3
6
bed broadPeak
6
bigBed broadPeak
4
bed bedgraph
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
Organism
21
Homo sapiens
Biosample type
tissue
15
primary cell
5
in vitro differentiated cells
1
stem cell
Organ
153
epithelium
142
pancreas
57
heart
54
artery
54
blood vessel
54
vasculature
21
connective tissue
20
liver
14
embryo
12
kidney
brain
2
adipose tissue
2
musculature of body
1
mammary gland
1
pericardium
Project
21
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
21
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
organ_slims!
brain
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
pCHi-C
small RNA-seq
primary cell
osteoblast
5
pancreatic stellate cell
4
mesenchymal stem cell of adipose
1
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
+ See 2 more…
in vitro differentiated cells
adipocyte
4
cardiac fibroblast
1
stem cell
mesenchymal stem cell
1
See all biosamples
Download