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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
WGBS
6
RRBS
1
DNAme array
Assay category
936
DNA binding
681
Transcription
348
DNA accessibility
55
DNA methylation
18
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
6
February, 2021
5
July, 2019
1
August, 2017
1
May, 2021
1
November, 2018
Available data
41
zippedFastqFolder
8
fastq
7
bed bedMethyl
7
bigBed bedMethyl
6
tsv
1
bam
1
bigWig
Organism
55
Homo sapiens
Biosample type
54
primary cell
tissue
1
cell line
Organ
53
epithelium
47
pancreas
kidney
2
liver
1
brain
1
connective tissue
eye
1
heart
1
musculature of body
1
vasculature
Project
47
HPAP
8
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
47
Klaus Kaestner, Upenn
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
organ_slims!
eye
kidney
BIOSAMPLE
ASSAY
55 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 4 more…
cell line
HepG2
1
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