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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
935
ChIP-seq
442
total RNA-seq
263
ATAC-seq
189
single cell RNA-seq
56
snATAC-seq
48
WGBS
32
pCHi-C
28
DNase-seq
14
Hi-C
9
RRBS
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
9
DNA methylation
Date released
8
July, 2019
1
August, 2017
Available data
9
bed bedMethyl
9
bigBed bedMethyl
1
fastq
Organism
9
Homo sapiens
Biosample type
tissue
9
primary cell
Organ
6
epithelium
3
kidney
1
brain
1
connective tissue
1
eye
1
heart
1
liver
1
musculature of body
vasculature
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
9
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
tissue
organ_slims!
vasculature
BIOSAMPLE
ASSAY
9 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
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