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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
Assay category
5
DNA accessibility
3
3D chromatin structure
3
Transcription
DNA methylation
Target of assay
3
control
Date released
November, 2017
6
July, 2019
5
June, 2019
Available data
11
bigWig
8
bam
8
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
3
hdf5
3
tsv
Organism
11
Homo sapiens
Biosample type
tissue
11
primary cell
Organ
450
epithelium
394
pancreas
136
connective tissue
113
liver
96
vasculature
94
blood vessel
79
heart
69
blood
69
bodily fluid
68
artery
52
kidney
37
embryo
22
vein
13
musculature of body
11
brain
4
eye
3
adipose tissue
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
11
AMP
Genome assembly (visualization)
11
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
biosample_type!
tissue
assay_slims!
DNA methylation
month_released!
November, 2017
BIOSAMPLE
ASSAY
11 results
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DNase-seq
Hi-C
single cell RNA-seq
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
cerebellar granule cell
2
Purkinje cell
1
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